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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs12270246 chr11:117955150 C/T CHEK1 chr11:125495031-125546150:+ -0.56 -6 4.6E-9 Box Plot
BLCA rs12270246 chr11:117955150 C/T DCPS chr11:126173647-126215644:+ -0.87 -6.31 7.69E-10 Box Plot
BLCA rs12270246 chr11:117955150 C/T DLAT chr11:111895538-111935114:+ -0.73 -6.42 3.98E-10 Box Plot
BLCA rs12270246 chr11:117955150 C/T DPAGT1 chr11:118967213-118979041:- -0.82 -5.98 5.2E-9 Box Plot
BLCA rs12270246 chr11:117955150 C/T H2AFX chr11:118964564-118966177:- -0.63 -6.23 1.21E-9 Box Plot
BLCA rs12270246 chr11:117955150 C/T HMBS chr11:118955576-118964259:+ -0.71 -6.24 1.19E-9 Box Plot
BLCA rs12270246 chr11:117955150 C/T NPAT chr11:108027942-108093369:- -0.64 -6.2 1.44E-9 Box Plot
BLCA rs12270246 chr11:117955150 C/T RNF26 chr11:119205237-119208023:+ -0.73 -6.05 3.38E-9 Box Plot
BLCA rs12270246 chr11:117955150 C/T SDHD chr11:111957548-112064528:+ -0.83 -6.72 6.65E-11 Box Plot
BLCA rs12270246 chr11:117955150 C/T SRPR chr11:126132882-126138949:- -0.93 -6.56 1.79E-10 Box Plot
BLCA rs12270246 chr11:117955150 C/T TBRG1 chr11:124492732-124505294:+ -0.7 -6.17 1.76E-9 Box Plot
BLCA rs12270246 chr11:117955150 C/T TIMM8B chr11:111955524-111957522:- -0.82 -7.68 1.33E-13 Box Plot
BLCA rs12270246 chr11:117955150 C/T ZNF259 chr11:116648436-116658766:- -0.8 -6.13 2.22E-9 Box Plot
BLCA rs12270246 chr11:117955150 C/T ZW10 chr11:113603909-113644533:- -0.74 -6.89 2.37E-11 Box Plot
BLCA rs12273552 chr11:77640120 G/A INTS4L1 chr7:64601603-64694600:+ 0.49 6.84 3.23E-11 Box Plot